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    papers
    Corresponding Author*
    
      - Naoko
Abe, Michio Hiroshima, Hideto Maruyama, Yuko Nakashima, Yukiko Nakano, Akira
Matsuda, Yasushi Sako, Yoshihiro Ito*, and Hiroshi Abe*
 Rolling circle amplification in a prokaryotic translation system using small circular RNA
 Angewandte Chemie International Edition,, accepted (2013)
- Binata Joddar*, Aydin Albayrak, Jeonghwa Kang, Mizuki Nishihara, Hiroshi
      Abe, Yoshihiro Ito*
 Sustained delivery of siRNA from dopamine-coated stainless steel surfaces
 Acta Biomaterialia 9,
6753-6761 (2013).
- Hisao Saneyoshi , Takushi Mashimo, Ken Hatano, Yoshihiro Ito*, Hiroshi
      Abe*
 Synthesis of a nucleoside phosphorodithioate analogue responsive to microenvironmental
      changes through chiral induction
 Tetrahedron Letters54,
1080–1083 (2013).
- Pallavi Ananda Kadengodlu,  Toshiro Aigaki, Hiroshi Abe*, Yoshihiro Ito*
 Cationic cholesterol-modified gelatin as an in vitro siRNA delivery vehicle
 Molecular Biosystems 9, 965-968 (2013).
- Mitsuhiro Arisawa, Yuki Fujii, Hiroshige Kato, Hayato Fukuda, Takashi Matsumoto,
      Mika Ito, Hiroshi Abe, Yoshihiro Ito, and Satoshi Shuto.
 One-Pot Ring-Closing Metathesis/1,3-Dipolar Cycloaddition through Assisted
      Tandem Ruthenium Catalysis: Synthesis of a Dye with Isoindolo[2,1-a]quinoline
      Structure
 Angewandte Chemie International Edition 52
(3) 1003-1007 (2013).
- Aya Shibata, Yoshihiro Ito, Hiroshi Abe
 RNA-templated molecule release induced protein expression in bacterial
      cells
 Chemical Communication, 49, 270-272 (2013).
- Mingzhe Liu, Seiichi Tada, Mika Ito, Hiroshi Abe, Yoshihiro Ito
 In vitro selection of a photo-responsive peptide aptamer by ribosome display
 Chemical Communication, , 48, 11871-11873 (2012).
- Hiroki Kumamoto, Sachiko Kawahigashi, Hiromi Wakabayashi, Tomohiko Nakano,
      Tomoko Miyaike, Yasuyuki Kitagawa, Hiroshi Abe, Mika Ito, Kazuhiro Haraguchi,
      Jan Balzarini,c Masanori Babad, Hiromichi Tanaka
 Tuning efficiency of the 4-exo-trig cyclization by the electronic effect:
      ring closure of 3,3-difluoro-4-pentenyl carbon radicals and synthesis of
      a gem-difluorocyclobutane nucleosidew
 Chemical Communication, 48, 10993-10995 (2012)
- Yasutsugu Tamura, Kazuhiro Furukawa, Rei Yoshimoto, Yuto Kawai, Minoru
      Yoshida, Satoshi Tsuneda, Yoshihiro Ito, Hiroshi Abe
 Detection of Pre-mRNA Splicing in vitro by an RNA-Templated Fluorogenic
      Reaction
 Bioorganic Medicinal Chemistry Letters, 22(23) 7248-7251 (2012)
- Mitsuhiro Arisawa, Yayoi Kasay, Tohru Obata, Takuma Sasaki, Tomonori Nakamura,
      Takuya Araki, Koujirou yamamoto, Akito Sasaki, Akihito Yamano, Mika Ito,
      Hiroshi Abe, Yoshihiro Ito, and Satoshi Shuto
 Design and synthesis of indomethacin analogues that inhibit P-glycoprotein
      and/or multidrug resistant protein without Cox inhibitory activity
 Journal of Medicinal Chemistry, 55 (18) 8152-8163 (2012)
- Pallavi Ananda Kadengodlu, Takehisa Hebishima, Shin-nosuke Takeshima, Mika
      Ito, Mingzhe Liu, Hiroshi Abe, Yoko Aida, Toshiro Aigaki, and Yoshihiro
      Ito
 Positively but not negatively charged cholesterol–recombinant human gelatins
      foster the cellular uptake of proteins and murine immune reactions
 International Journal of Nanomedicine, 7:5437-5450 (2012).
- Jeonghwa Kang, Makoto Sakuragi, Aya Shibata, Hiroshi Abe, Takashi Kitajima,
      Seiichi Tada, Masayoshi Mizutani, Hitoshi Ohmori, Hiroto Ayame, Tae Il
      Son, Toshiro Aigaki, and Yoshihiro Ito
 Immobilization of epidermal growth factor on titanium and stainless steel
      surfaces via dopamine treatment
 Materials Science and Engineering: C, 32 (8) 2552-2561 (2012)
- Mika Ito, Aya Shibata, Jie Zhang, Michio Hiroshima, Yasushi Sako, Yukiko
      Nakano, Kyoko Kojima-Aikawa, Bengt Mannervik, Satoshi Shuto, Yoshihiro
      Ito, Ralf Morgenstern*, Hiroshi Abe*
 Universal Caging Group for In Cell Detection of Glutathione Transferase
      Applied to 19F NMR and Bioluminogenic Probes
 ChemBioChem, 13 (10) 1428-1432, (2012)
- Hiroshi Abe,* Naoko Abe, Aya Shibata, Keiji Ito, Yoshiyuki Tanaka, Mika
      Ito, Hisao Saneyoshi, Satoshi Shuto, and Yoshihiro Ito*
 Structure Formation and Catalytic Activity of DNA in Organic Solvents
 Angewandte Chemie International Edition, 51 (26) 6475-6479, (2012)
- Naoko Abe, Hiroshi Abe*, Yoshihiro Ito
 Synthesis of Dumbbell-Shaped Cyclic RNAs for RNA Interference.
 Current Protocol Nucleic Acid Chemistry. 48:16.4.1-16.4.11 (2012)
- Aya Shibata, Hiroshi Abe*, and Yoshihiro Ito
 Oligonucleotide-Templated Reactions for Sensing Nucleic Acids
 Molecules, 17(3), 2446-2463 (2012)
- Kazuhiro Furukawa, Hiroshi Abe*, Yasutsugu Tamura, Rei Yoshimoto, Minoru
      Yoshida, Satoshi Tsuneda and Yoshihiro Ito*
 Fluorescent Detection of Intron Lariat RNAs with Reduction-Triggered Fluorescence
      Probes
 Angewandte Chemie International Edition, 50(50) 12020-12023, (2011).
- Kazuhiro Haraguchi, Hisashi Shimada, Keigo Kimura, Genta Akutsu, Hiromichi
      Tanaka, Hiroshi Abe, Takayuki Hamasaki, Masanori Baba, Elizabeth A. Gullen,
      Ginger E. Dutschman, Yung-Chi Cheng, and Jan Balzarini 
 Synthesis of 4′-Ethynyl-2′-deoxy-4′-thioribonucleosides and Discovery of
      a Highly Potent and Less Toxic NRTI
 ACS Medicinal Chemistry Letters, 2(9), 692-697, (2011).
- Jie Zhang, Aya Shibata, Mika Ito, Satoshi Shuto, Yoshihiro Ito, Bengt Mannervik,
      Hiroshi Abe*, Ralf Morgenstern*
 Synthesis and characterization of a series of highly fluorogenic substrates
      for glutathione transferases, a general strategy
 Journal of the American Chemical Society, 133(35), 14109-14119, (2011).
- Naoko Abe, Hiroshi Abe*, Chisato Nagai, Mitsuru Harada, Hiroto Hatakeyama,
      Hideyoshi Harashima, Takahito Ohshiro, Mizuki Nishihara, KazuhiroFurukawa,
      Mizuo Maeda, Satoshi Tsuneda, and Yoshihiro Ito*
 Synthesis, structure, and biological activity of dumbbell-shaped nanocircular
      RNAs for RNA interference
 Bioconjugate Chemistry, 22(10), 2082-2092, (2011).
- Katarina Johansson, Mika Ito, Carolien M. S. Schophuizen, Sherin Mathew
      T, Vanina D. Heuser, Jie Zhang, Miyuki Shimoji, Marie Vahter, Wee Han Ang,
      Paul J. Dyson, Aya Shibata, Satoshi Shuto, Yoshihiro, Ito, Hiroshi Abe,
      Ralf Morgenstern*
 Characterization of New Potential Anticancer Drugs Designed To Overcome
      Glutathione Transferase Mediated Resistance
 Molecular Pharmaceutics., 8(5), 1698-1708, (2011).
- Mingzhe Liu, Muye Xu, Xian Jun Loh, Hiroshi Abe, Takeshi Tsumuraya, Ikuo
      Fujii, Jun Li, Tae Il Son, and Yoshihiro Ito*
 PEGylated antibody in organic media
 Journal of Bioscience and Bioengineering, 111(5), 564-568 (2011).
- Yuko Nakashima, Hiroshi Abe*, Naoko Abe, Kyoko Aikawa, Yoshihiro Ito*
 Branched RNA Nanostructures for RNA Interference
 Chemical Communication, 47, 8367-8369 (2011).
- Mitsuhiro Arisawa*, Yayoi Kasaya, Tohru Obata, Takuma Sasaki, Mika Ito,
      Hiroshi Abe, Yoshihiro Ito, Akihito Yamano, Satoshi Shuto*
 Design and Synthesis of Conformationally Restricted Indomethacin Analogues.
      Identification of Indomethacin Analogues that Enhance Doxorubicin Cytotoxicity
      in Multidrug Resistant Cells without Cyclooxygenase Inhibitory Activity
 ACS Medicinal Chemistry Letter, 2, 353-357 (2011).
- Naoko Abe, Hiroshi Abe*, Takahito Ohshiro, Yuko Nakashima, Mizuo Maeda,
      Yoshihiro Ito*
 Synthesis and Characterization of Small Circular Double-Stranded RNAs
 Chemical Communication 47, 2125-2127 (2011).
- Yasuyuki Hirama, Hiroshi Abe, Noriaki Minakawa, Akira Matsuda
 Synthesis and properties of a novel nucleoside derivative possessing a
      2,3,5,6-tetraazabenzo[cd]azulene skeleton.
 Tetrahedron 66, 8402-8406 (2010).
- Kazuhiro Furukawa, Hiroshi Abe*, Satoshi Tsuneda, Yoshihiro Ito*
 Photoactivatable fluorescein derivatives with azidomethyl caging groups
      for tracing oligonucleotides in living human cells.
 Organic Biomolecular Chemistry 8, 2309-2311 (2010).
- Mingzhe Liu, Hiroshi Jinmei, Hiroshi Abe, Yoshihiro Ito*
 In vitro selection of a photoresponsive RNA aptamer to hemin.
 Bioorganic & Medicinal Chemistry Letters 20, 2964–2967 (2010).
- Tetsuya Mochizuki, Akihiko Tanimura, Akihiro Nezu, Mika Ito, Hiroshi Abe,
      Yoshihiro Ito, Mitsuhiro Arisawa a, Satoshi Shuto*
 Design and synthesis of indole derivatives of adenophostin A. A entry into
      subtype-selective IP3 receptor ligands.
 Tetrahedron Letter 51, 977-979 (2010).
- Takaaki Kobayashi, Mizuki Watanabe, Akira Yoshida, Shizuo Yamada, Mika
      Ito, Hiroshi Abe, Yoshihiro Ito, Mituhiro Arisawa, Satoshi Shuto*
 Synthesis and structural and pharmacological properties of cyclopropane-based
      conformationally restricted analogs of 4-methylhistamine as histamine H3/H4
      receptor ligands.
 Biorganic Medicinal Chemistry 18, 1076-1082 (2010).
- Aya Shibata, Hiroshi Abe*, Mika Ito, Yuko Kondo, Shigeru Shimizu, Kyoko
      Aikawa, Yoshihiro Ito*
 DNA templated nucleophilic aromatic substitution reactions for fluorogenic
      sensing of oligonucleotides
 Chemical Communication, 43, 6586-6588 (2009).
- Aya Shibata, Hiroshi Abe*, Kazuhiro Furukawa, Satoshi Tsuneda, Yoshihiro
      Ito*
 Reduction-triggered fluorescence probe for peptide-templated reactions
 Chemical Pharmaceutical Bulletin, 57, 1223-1226 (2009).
- Johan Ålander, Katarina Johansson, Vanina Dahlström Heuser, Henny Farebo,
      Julia Järvliden, Hiroshi Abe, Aya Shibata, Mika Ito, Yoshihiro Ito, Ralf
      Morgenstern*
 Characterisation of a New Fluorogenic Substrate for Microsomal Glutathione
      Transferase 1
 Analytical Biochemistry, 390, 52-56 (2009).
- Norihiko Hayazawa*, Kentaro Furusawa, Atsushi Taguchi, Satoshi Kawata,
      Hiroshi Abe
 Tip-enhanced two-photon excited fluorescence microscopy with a silicon
 Applied Physics Letters 94, 193112 (2009).
- Kazuhiro Furukawa, Hiroshi Abe*, Kayoko Hibino, Yasushi Sako, Satoshi Tsuneda,
      Yoshihiro Ito*
 Reduction-triggered Fluorescent Amplification Probe for Detection of endogenous
      RNAs in Living Human Cells
 Bioconjugate Chemistry, 20, 1026–1036 (2009).
- Mingzhe Liu, Takuma Kagahara, Hiroshi Abe, and Yoshihiro Ito*
 In Vitro Selection of Hemin-Binding catalytic RNA
 Bioorganic Medicinal Chemistry Letters 19, 1484-1487 (2009) .
- Kazuhiro Furukawa, Hiroshi Abe*, Jin Wang, Miwako Uda, Satoshi Tsuneda,
      Yoshihiro Ito*
 Reduction-triggered red fluorescent probes for dual-color detection of
      oligonucleotide sequences
 Organic Biomolecular Chemistry 7, 671-677 (2009).
- Mingzhe Liu, Takuma Kagahara, Hiroshi Abe, and Yoshihiro Ito*
 Direct In Vitro Selection of Hemin-Binding DNA Aptamer with Peroxidase
      Activity
 Bulletin of the Chemical Society of Japan, 82, 99-104 (2009).
- Kazuhiro Frukawa, Hiroshi Ab*e, Naoko Abe, Mitsuru Harada, Satoshi Tsuneda,
      Yoshihiro Ito*
 Fluorescence generation from tandem repeats of a malachite green RNA aptamer
      using rolling circle transcription.
 Bioorganic Medicinal Chemistry Letters 18, 4562-4565 (2008).
- Hiroshi Abe*, Jin Wang, Kazuhiro Furukawa, Kazuma Oki, Miwako Uda, Satoshi
      Tsuneda, Yoshihiro Ito*
 A reduction-triggered fluorescence probe for sensing nucleic acids
 Bioconjugate Chemistry, 19, 1219-1226 (2008).
- Adam P Silverman, Hiroshi Abe, Eric T Kool*
 Quenched autoligation probes.
 Methods in Molecular Biology, 429, 161-170 (2008).
- Aya Shibata, Kazuhiro Frukawa, Hiroshi Abe*, Satsohi Tsuneda, Yoshihiro
      Ito*
 Rhodamine-based fluorogenic probe for imaging biological thiol
 Bioorganic Medicinal Chemistry Letters 18, 2246-2249 (2008).
- Satoshi Shuto*, Satoshi Ichikawa, Hiroshi Abe, Akira Matsuda*
 Stereoselective glycosylation based on the conformational restriction of
      pyranoses.
 Yuki Gosei Kagaku Kyokaishi 66, 50-60 (2008).
- Hiroki Kumamoto*, Nonoko Takahashi, Tomomoi Shimamura, Hiromichi Tanaka,
      Kazuo T. Nakamura, Takayuki Hamasaki, Masanori Baba, Hiroshi Abe, MasahikoYano,
      Nobuyuki Kato.
 Synthesis of (+/-)-9-[c-4, t-5-bis(hydroxymethyl)cyclopent-2-en-r-1-yl]-9H-adenine
      (BCA) derivatives branched at the 4'-position based on intramolecular SH2'
      cyclization.
 Tetrahedron, 64, 1494-1505 (2008).
- Mingze Liu, Hiroshi Jinmei, Hiroshi Abe*, Yoshihiro Ito*
 Chemical aminoacylation of RNA by an intermolecular adenosine transfer
      reaction
 Chemistry Letters. 37, 102-103 (2008).
- Hiroshi Abe*, Yuko Kondo, Hiroshi Jinmei, Naoko Abe, Kazuhiro Furukawa,
      Atsushi Uchiyama, Satoshi Tsuneda, Kyoko Aikawa, Isamu Matsumoto, Yoshihiro
      Ito*
 Rapid DNA chemical ligation for amplification of RNA and DNA signal
 Bioconjugate Chemistry, 19, 327-333 (2008).
- Naoko Abe, Hiroshi Abe*, Yoshiiro Ito*
 Dumbbell-shaped nanocircular RNAs for RNA interference.
 Journal of the American Chemical Society, 129, 15108-15109 (2007).
- Tetsuya Mochizuki, Yoshihiko Kondo, Hiroshi Abe, Stephen C. Tovey, Skarlatos
      G. Dedos, Colin W. Taylor, Michael Paul, Barry V. L. Potter, Akira Matsuda,
      Satoshi Shuto* 
 Synthesis of adenophostin A analogues conjugating an aromatic group at
      the 5'-position as potent IP3 receptor ligands.
 Journal of Medicinal Chemistry, 49, 5750-5758 (2006).
- Tetsuya Mochizuki, Yoshihiko Kondo, Hiroshi Abe, Collin W. Taylor, Barry
      V. L. Potter, Akira Matsuda, Satoshi Shuto*
 Design and synthesis of 5'-deoxy-5'-phenyladenophostin A, a highly potent
      IP3 receptor ligand.
 Organic Letters, 8, 1455-1458 (2006).
- Masaru Terauchi, Hiroshi Abe, Stephen C. Tovey, Skarlatos G. Dedos, Colin
      W. Taylor, Michael Paul, Melanie Trusselle, Barry V. L. Potter, Akira Matsuda,
      Satoshi Shuto*
 A systematic study of C-glucoside trisphosphates as myo-inositol trisphosphate
      receptor ligands. synthesis of alpha -C-glucoside trisphosphates based
      on the conformational restriction strategy.
 Journal of Medicinal Chemistry, 49, 1900-1909 (2006).
- Hiroshi Abe, Eric T. Kool*
 Flow cytometric detection of specific RNAs in native human cells with quenched
      auto ligating FRET probes
 Proceedings of the National Academy of Sciences of the United States of
      America, 103, 263-268 (2006).
- Masaru Terauchi, Yumi Yahiro, Hiroshi Abe, Satoshi Ichikawa, Stephen C.
      Tovey, Skarlatos G. Dedos, Colin W. Taylor, Barry. V. L. Potter, Akira
      Matsuda*, Satoshi Shuto*
 Synthesis of 4,8-anhydro-D-glycero-D-ido-nonanitol 1,6,7-trisphosphate
      as a novel IP3 receptor ligand using a stereoselective radical cyclization
      reaction based on a conformational restriction strategy.
 Tetrahedron 61, 3697-3707 (2005).
- Hiroshi Abe, Eric T. Kool*
 Destabilizing Universal Linkers for Signal Amplification in Self-Ligating
      Probes for RNA.
 Journal of the American Chemical Society, 126, (43), 13980-13986 (2004).
- Yuji Kazuta, Hiroshi Abe, Akira Matsuda, Satoshi Shuto*
 Highly Stereoselective Grignard Addition to Cis-Substituted C-Cyclopropylaldonitrones.
      The Bisected s-Trans Transition State Can Be Stabilized Effectively by
      the Lewis Acid-Coordination
 Journal of Organic Chemistry, 69, 9143-9150 (2004).
- Masaru Terauchi, Hiroshi Abe, Aakira Matsuda*, Satoshi Shuto*
 An efficient synthesis of beta-C-glycosides based on the conformational
      restriction strategy: Lewis acid promoted silane reduction of the anomeric
      position with complete stereoselectivity.
 Organic Letters, 6, (21), 3751-3754, (2004).
- Yuji Kazuta, Hiroshi Abe, Tamotsu Yamamoto, Akira Matsuda, Satoshi Shuto*
 The unusual 1,4-chelation-controlled nucleophilic addition to aldehydes
      with high stereoselectivity. A systematic study of stereoselectivity in
      the addition reaction of carbon nucleophiles to cis-substituted cyclopropanecarbaldehydes.
 Tetrahedron, 60, (31), 6689-6703 (2004).
- Sinsuke Sando, Hiroshi Abe, Eric T. Kool*
 Quenched auto-Ligating DNAs: Multicolor identification of Nucleic Acids
      at Single Nucleotide Resolution.
 Journal of the American Chemical Society, 126, (4), 1081-1087 (2004).
- Satoshi Shuto*, Masaru Terauchi, YumiYahiro, Hiroshi Abe, Satoshi Ichikawa,
      Akira Matsuda*
 Stereoselective synthesis of a- and b-C-glucosides via radical cyclization
      with an allylsilyl tether. Control of the stereoselectivity by changing
      the conformation of the pyranose ring.
 Tetrahedron Lett.45, 6819 (2004).
- Kazuya Yamaguchi, Yuji Kazuta, Hiroshi Abe, Akira Matsuda, Satoshi Shuto*
 Construction of a cis-Cyclopropane via Reductive Radical Decarboxylation.
      Enantioselective Synthesis of cis- and trans-1-Arylpiperazyl-2-phenylcyclopropanes
      Designed as Antidopaminergic Agents.
 Journal of Organic Chemistry, 68, (24), 9255-9262 (2003).
- Hiroshi Abe, Masaru Terauchi, Akira Matsuda, Satoshi Shuto*
 A Study on the Conformation-Anomeric Effect-Stereoselectivity Relationship
      in Anomeric Radical Reactions, Using Conformationally Restricted Glucose
      Derivatives as Substrates.
 Journal of Organic Chemistry, 68, (19), 7439-7447 (2003).
- Yuji Kazuta, Hiroshi Abe, Tamotsu Yamamoto, Akira Matsuda*, Satoshi Shuto*
 A systematic study of the hydride reduction of cyclopropyl ketones with
      structurally simplified substrates. Highly stereoselective reductions of
      trans-substituted cyclopropyl ketones via the bisected s-cis conformation.
 Journal of Organic Chemistry, 68, (9), 3511-3521 (2003).
- Satoru Tamura, Hiroshi Abe, Akira Matsuda*, Satoshi Shuto*
 Control of alpha/beta stereoselectivity in Lewis acid promoted C-glycosidations
      using a controlling anomeric effect based on the conformational restriction
      strategy.
 Angewandte Chemie International Edition, 42, (9), 1021-1023 (2003).
- Satoshi Shuto, Maki Kanazaki, Isamu Sugimoto, Satoshi Ichikawa, Yuki Nagasawa,
      Yoshihito Ueno, Hiroshi Abe, Noriaki Minakawa, Makoto Sukeda, Tetsuya Kodama,
      Makoto Nomura, Akira Matsuda*
 Development of new radical reactions with a vinylsilyl group and their
      application to the synthesis of branched-chain sugar nucleosides.
 Recent Advances in Nucleosides, 21-55 (2002).
- Kenji Kuwayama, Seiji Miyauchi, Ryoko Tateoka, Hiroshi Abe, Naoki Kamo*
 Fluorescein uptake by a monocarboxylic acid transporter in human intestinal
      Caco-2 cells.
 Biochemical pharmacology, 63, (1), 81-88 (2002).
- Hiroshi Abe, Satoshi Shuto*, Akira Matsuda* 
 Highly alpha- and beta-Selective Radical C-Glycosylation Reactions Using
      Controlling Anomeric Effect Based on the Conformational Restriction Strategy.
      A Study on the Conformation-Anomeric Effect- Stereoselectivity Relationship
      in Anomeric Radical Reactions.
 Journal of the American Chemical Society, 123, (48), 11870-11882 (2001).
- Hiroshi Abe, Satoshi Shuto*, Satoru Tamura, Akira Matsuda*
 An efficient method for preparing fully O-silylated pyranoses conformationally
      restricted in the unusual 1C4-form.
 Tetrahedron Letters, 42, 6159-6161 (2001).
- Satoshi Shuto*, Masaya Fukuoka, Hiroshi Abe, Akira Matsuda*
 Intracellular Ca2+-mobilizing adenine nucleotides. Synthesis and biological
      activity of cyclic ADP-carbocyclic-ribose and C-glycosidic analog of adenophostin
      A.
 Nucleosides, Nucleotides & Nucleic Acids, 20, (4-7), 461-470 (2001).
- Ryoko Tateoka, Hiroshi Abe, Seiji Miyauchi, Satoshi Shuto, Akira Matsuda,
      Michiya Kobayashi, Katsumi Miyazaki, Naoki Kamo*
 Significance of Substrate Hydrophobicity for Recognition by an Oligopeptide
      Transporter (PEPT1).
 Bioconjugate Chemistry, 12, (4), 485-492 (2001).
- Yuji Kazuta, Satoshi Shuto*, Hiroshi Abe, Akira Matsuda*
 The bisected s-trans conformation-controlled highly stereoselective addition
      of Grignard reagents to C-cyclopropylaldonitrone. An efficient synthesis
      of 1-phenyl-2-[(S)-1-aminoalkyl]-N,N-diethylcyclopropanecarboxamides, a
      new class of potent NMDA receptor antagonists.
 Journal of the Chemical Society, Perkin Transactions 1, (6), 599-604 (2001).
 Organic Biomolecular Chemistry, 1, (9), 1634 (2003).
- Takashi Naka, Noriaki Minakawa, Hiroshi Abe, Daisuke Kaga, Akira Matsuda*
 The Stereoselective Synthesis of 4'-beta-Thioribonucleosides via the Pummerer
      Reaction.
 Journal of the American Chemical Society, 122, (30), 7233-7243 (2000).
- Satoshi Shuto, Masaru Terauchi, Yumi Yahiro, Hiroshi Abe, Satoshi Ichikawa,
      Akira Matsuda*
 Stereoselective synthesis of alpha- and beta-C-glucosides via radical cyclization
      with an allylsilyl tether. Control of the stereoselectivity by changing
      the conformation of the pyranose ring.
 Tetrahedron Lett., 41, (21), 4151-4155 (2000).
- Hiroshi Abe, Satoshi Shuto, Akira Matsuda
 Synthesis of the C-Glycosidic Analogue of Adenophostin A and Its Uracil
      Congener as Potential IP3 Receptor Ligands. Stereoselective Construction
      of the C-Glycosidic Structure by a Temporary Silicon-Tethered Radical Coupling
      Reaction.
 Journal of Organic Chemistry, 65, (14), 4315-4325 (2000).
- Satoshi Shuto*, Isamu Sugimoto, Hiroshi Abe, Akira Matsuda*
 Mechanistic Study of the Ring-Enlargement Reaction of (3-Oxa-2-silacyclopentyl)methyl
      Radicals into 4-Oxa-3-silacyclohexyl Radicals. Evidence for a Pentavalent
      Silicon-Bridging Radical Transition State in 1,2-Rearrangement Reactions
      of beta-Silyl Radicals.
 Journal of the American Chemical Society, 122, (7), 1343-1351 (2000).
- Hiroshi Abe, Satoshi Shuto, Akira Matsuda*
 Nucleosides and nucleotides. 194. Synthesis of the C-glycosidic analog
      of adenophostin A, a potent IP3 receptor agonist, using a temporary silicon-tethered
      radical coupling reaction as the key step.
 Tetrahedron Letters., 41, (14), 2391-2394 (2000).
- Hiroshi Abe, Momoko Satoh, Seiji Miyauchi, Satoshi Shuto, Akira Matsuda,
      Naoki Kamo*
 Conjugation of Dipeptide to Fluorescent Dyes Enhances Its Affinity for
      a Dipeptide Transporter (PEPT1) in Human Intestinal Caco-2 Cells.
 Bioconjugate Chemistry, 10, (1), 24-31 (1999).
- Shun-ichi Hashimoto*, Hiroki Sakamoto, Takeshi Honda, Hiroshi Abe, Sei-ichi
      Nakamura, Shiro Ikegami
 Armed-disarmed" glycosidation strategy based on glycosyl donors and
      acceptors carrying phosphoroamidate as a leaving group: a convergent synthesis
      of globotriaosylceramide.
 Tetrahedron Letters., 38, (52), 8969-8972 (1997).
TOP
    Books
    
      - 阿部洋、「有機溶媒に溶ける核酸―DNA触媒の新たな可能性」、現代化学 2013年 1月号
      
- 古川和寛、阿部洋、伊藤嘉浩、常田聡
 「生細胞内RNA検出のための化学反応プローブ」「難培養微生物研究の最新技術II~ゲノム解析を中心とした最前線と将来展望~」大熊盛也
 工藤俊章監修、シーエムシー出版、p.19-27 (2010)
 
- 阿部洋
 終わりのない核酸の話
 ケミカルバイオロジー入門
 オーム社
- 阿部洋、古沢和寛、常田聡、伊藤嘉浩
 細胞内RNA可視化のためのバイオプローブ
 蛋白質 核酸 酵素
 共立出版株式会社 第52巻 第13号 p1619 (2007)
- 和田章、阿部洋、伊藤嘉浩
 アプタマー医薬
 「抗体医薬の最前線」
 シーエムーシー出版 p213 (2007)
- 阿部洋、古川和寛、常田聡、伊藤嘉浩
 細胞内遺伝子発現検出用の蛍光バイオプローブの設計と合成
 「一細胞内定量解析の最前線」
 シーエムーシー出版 p135 (2007)
- 阿部洋、伊藤嘉浩
 バイオプローブを用いたイメージング法とチップ解析法
 「ナノオプティクス・ナノフォトニクスのすべて」
 フロンティア出版 p157 (2006).
TOP
    reviews
    
      - Seiichi
Tada, Hiroshi Abe, and Yoshihiro Ito, "PEGylated Antibodies and DNA in
Organic Media and Genetic PEGylation" in "Green Polymer 2." ed.
by H. N. Chen and R. A. Gross, ACS, accepted (2013)
      
- 阿部洋、阿部奈保子、柴田綾、伊藤嘉浩, 「ナノ構造を制御したRNAを用いたRNA干渉法」、アンチセンスDNA/RNA研究会誌 page 3, Vol.16, No.2, November 2012
      
- 阿部洋、柴田綾、古川和寛、常田聡、伊藤嘉浩、「還元反応を引き金とするoff/on型蛍光プローブを用いたRNA検出法の開発」、化学と生物50巻7月号、540p、2012年7月
      
- 劉明哲、阿部洋、伊藤嘉浩
 「進化分子工学による高分子触媒合成と生体高分子のハイブリッド化」
 高分子論文集、68(7), 405-416(2011)
- Mingzhe Liu, Hiroshi Abe, Yoshihiro Ito
 Hemin-Binding Aptamers and Aptazymes
 ACS Symposium Series 1043(Green Polymer Chemistry), 111-123 (2010).
- 伊藤嘉浩、北嶋隆、阿部洋
 細胞機能制御高分子と再生医療
 高分子 58巻、3月号 2009年3月
- 阿部洋,古川和寛,常田聡,伊藤嘉浩,
 細胞内遺伝子シグナルの解析
 生物工学,日本生物工学会,86(6), 268-270, (2008)
- Yoshihiro Ito, Hiroshi Abe, Akira Wada, Mingzhe Liu
 Design and synthesis of biorelated polymers by combinatorial bioengineering.
 ACS Symposium Series 999(Polymer Biocatalysis and Biomaterials II), 194-215 (2008),.
- 阿部洋、阿部奈保子、原田充、常田聡、伊藤嘉浩
 ダンベル型ナノサークルRNAでRNA干渉を長期安定に
 バイオサイエンスとインダストリー
 バイオインダストリー協会 第66巻 No.8 (2008)
- 阿部洋、和田章、伊藤嘉浩
 新機能性核酸・タンパク質を生み出すコンビナトリアル・バイオエンジニアリング
 生物工学会誌 第84巻 第8号 p309 (2006).
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    Proceedings
    
      - Aya Shibata, Hiroshi Abe, Kazuhiro Furukawa, Satoshi Tsuneda, Yoshihiro
      Ito
 rotein detection using oligonucleotide probes.
 Nucleic Acids Symposium Series, 53, 157-158 (2009).
- Hiroshi Abe, Naoko Abe, Miwako Uda, Satoshi Tsuneda, Yoshihiro Ito.
 Synthetic nanocircular RNA for controlling of gene expression
 Nucleic Acids Symposium Series, 53, 65-66 (2009).
- Mingze Liu, Takuma Kagahara, Hiroshi Abe, Yoshihiro Ito.
 In vitro selection of RNA aptamer to hemin.
 Nucleic Acids Symposium Series,, 52, 513-514 (2008).
- Hiroshi Abe, Naoko Abe, Mitsuru Harada, Satoshi Tsuneda, Yoshihiro Ito.
 Nanocircular RNAs for RNA interference.
 Nucleic Acids Symposium Series, 52, 505-506 (2008).
- Kazuhiro Furukawa, Hiroshi Abe, Jin Wang, Kazuma Oki, Miwako Uda, Satoshi
      Tsuneda, Yoshihiro Ito.
 Fluorogenic probe triggered by reduction for nucleic acids sensing.
 Nucleic Acids Symposium Series,, 52, 353-354 (2008).
- Yuko Kondo, Hiroshi Abe, Hiroshi Jinmei, Naoko Abe, Kyoko Aikawa, Isamu
      Matsumoto, Yoshihiro Ito.
 Multiple chemical ligation under thermal cycle.
 Nucleic Acids Symposium Series,, 51, 365-366 (2007).
- Mingze Liu, Hiroshi Jinmei, Koji Fukuzono, Hiroshi Abe, Yoshihiro Ito.
      
 Intermolecular transfer of aminoacylated adenosine towards chemical aminoacylation
      of tRNA.
 Nucleic Acids Symposium Series,, 51, 353-354 (2007).
- Hiroshi Abe, Naoko Abe, Yoshihiro Ito.
 Structure analysis of oligonucleotide in organic solvent.
 Nucleic Acids Symposium Series,, 50, 25-26 (2006).
- Hiroshi Abe, Eric T. Kool.
 Universal linkers for signal amplification in auto-ligating probes.
 Nucleic Acids Symposium Series,, 49, 37-38 (2005).
- Satoshi Shuto, Tetsuya Mochizuki, Hiroshi Abe, Yoshihiko Kondo, Akira Matsuda.
 Synthesis and biological activity of adenophostin derivatives as IP3 receptor
      ligands.
 Nucleic Acids Symposium Series,, 2, 23-24 (2002).
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    Patents
    
      - 登録番号 US 8084201
 阿部洋、伊藤嘉浩 古川和寛
 蛍光発生分子
- 登録番号 ZA 2009/08044
 阿部洋、 伊藤嘉浩、 阿部奈保子、豊福秀一
 一本鎖環状RNAおよびその製造方法
- 登録番号US 8187825, PCT/JP2009/51579
 チオールの検出方法、
 阿部洋、伊藤嘉浩、柴田綾、伊藤美香
 出願日 平成21年1月31日
- 特開2008-259453
 阿部洋、 伊藤嘉浩、 古川和寛、氏内圭一、曽家義博
 化学反応プローブによる遺伝子検出
- 特開WO/2008/075718, 2008/6/26
 阿部洋、 伊藤嘉浩、 王瑾、 古川和寛
 蛍光発生分子
- 特開2009-132705, 2009/6/18
 阿部洋、伊藤嘉浩、柴田綾、小玉博明
 標的核酸配列に基づく目的分子の放出方法
- 特開2008-278784, 2008/11/20
 阿部洋、 伊藤嘉浩、 阿部奈保子、豊福秀一
 一本鎖環状RNAおよびその製造方法
- 特開WO/2009/102081, 2009/8/20
 阿部洋、 伊藤嘉浩、 阿部奈保子、原田充
 環状1本鎖核酸複合体およびその製造方法
- US 2006/199192 A1 
 Appl. No. 11/218,961
 Eric T. Kool、Hiroshi Abe
 Universal linker compositions for the release or transfer of chemical agents
      from polynucleotide
- 特願2008-68842
 伊藤嘉浩、劉明哲、阿部洋
 光駆動分子補足剤
 出願日 平成20年3月18日
- 特願 2009-229866
 蛍光発生分子および標的核酸検出方法
 阿部洋、伊藤嘉浩、柴田綾、伊藤美香
 出願日 平成21年10月1日
- 特願2010-054740
 細胞膜透過性ダンベル型RNA及びその製造方法
 阿部洋、伊藤嘉浩、阿部奈保子、烏田美和子、中嶋裕子、須賀晶子、高橋政代
- 特願2012-026506
 環状RNA及びタンパク質の製造方法
 阿部洋、阿部奈保子、伊藤嘉浩、西原みづき
- 特願2012-047367
 細胞内ビルドアップ型RNA
 阿部洋、伊藤嘉浩、丸山豪斗
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    Budgets
    
      - 科学研究費補助金 基盤B 「ナノ構造化と鋳型反応に基づくRNAの医薬機能創発」(研究代表者)(平成25年~平成27年)
      
- 理化学研究所 戦略的研究展開事業「新規翻訳現象の理解と利用」(研究代表者)(平成24年~平成25年)
      
- 科学研究費補助金:挑戦的萌芽研究「新規翻訳現象の解析と利用」(研究代表者)(平成24年) 
      
- 科学技術振興機構 さきがけ 研究領域:「脳神経回路の形成・動作と制御」
 「シナプス可塑性に関わるRNA群の革新的イメージング法の開発」(研究代表者)(平成23年~平成26年)
 
- 科学技術振興機構 戦略的国際科学技術協力推進事業 日本-スウェーデン研究交流
 「単一分子レベルの酵素反応解析から癌治療法開発までの複合領域研究」(研究代表者)(平成23年~平成25年)
 
- 科学技術振興機構 研究成果最適展開支援プログラム(A-STEP)
 「化学反応プローブとフローサイトメーターを用いた細菌の検出法の検討」(研究代表者)(平成23年~平成24年)
 
- 科学研究費補助金:若手研究(A)
 「遺伝子型に基づく細胞分離法」(研究代表者)(平成22年度~平成23年度)
 
- 理化学研究所 産業界連携制度交付金 
 「化学反応遺伝子検出プローブを用いたPOCウイルス検査法の開発」(研究代表者)(平成22年度~平成23年度)
 
- 保健医療分野における基礎研究推進事業
 「ダンベル型RNAを用いる新規RNA医薬品化技術の開発」(研究代表者)(平成21年度~平成23年度)
 
- 産業技術研究助成事業 NEDO
 「化学反応プローブよる生細胞内遺伝子発現の検出」(研究代表者)(平成18年度~平成22年度)
 
- 理化学研究所 戦略的研究展開事業
 「RNA環状ナノ構造体を用いるRNA干渉法」(研究代表者)(平成20年度~平成22年度)
 
- 科学研究費補助金:若手研究(B)
 「化学反応プローブによる遺伝子シグナルの増幅」(20750146)(研究代表者)(平成20年度〜平成21年度)
 
- 理化学研究所 奨励研究費
 「有機溶媒中の核酸の構造と機能に関する研究」(研究代表者)(平成18年度)
 
- 理化学研究所 奨励研究費
 「有機溶媒に溶ける核酸を用いる分子触媒の創製」(研究代表者)(平成19年度)
 
- 科学研究費補助金:若手研究(B)
 「細胞内蛋白質を可視化できるバイオプローブの開発」(18750159)(研究代表者)(平成18年度〜平成19年度)
 
- 科学研究費補助金:基盤研究(A)
 「金属・無機材料に結合できる成長因子の創成と医学応用」(研究分担者)(平成19年度〜平成21年度)
 
- 科学研究費補助金:萌芽研究
 「有機溶媒中での試験管内進化法による触媒探索」(研究分担者)(平成19年度〜平成20年度)
 
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