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Molecular Ensemble Development Research
  1. K. Hazama, Y. Takahide, M. Kimata, T. Terashima, S. Uji, Y. Kosaka, H. M. Yamamoto, and R. Kato
    "Electronic State of Magnetic Organic Conductor (Me-3,5-DIP)[Ni(dmit)2]2"
    J. Phys.: Conf. Ser., 150, 022025/1-4 (2010).

  2. S. Ohira-Kawamura, M. Tamura, R. Kato, K. Hiraki, T. Takahashi, and M. Iwasaki
    "Muon Spin Relaxation Studies on Magnetic Properties of Organic Conductors Pd(dmit)2 Salts and α-(BETS)2I3"
    J. Phys.: Conf. Ser., 225(1), 012041/1-5 (2010).

  3. H. Mizuno, T. K. Mal, M. Walchli, T. Fukano, M. Ikura, A. Miyawaki
    "Molecular Basis of Photochromism of a Fluorescent Protein Revealed by Direct 13C Detection under Laser Illumination"
    J. Biomol. NMR., 48, 237-246 (2010).

  4. I. Miyazaki, S. Simizu, H. Okumura, S. Takagi, and H. Osada
    "A Small-Mlecule Inhibitor Shows that Pirin Regulates Migration of Melanoma Cells"
    Nat. Chem. Biol., 6, 667-673 (2010).

  5. Y. Sun, F. Hahn, Y. Demydchuk, J. Chettle, M. Tosin, H. Osada, and P. F. Leadlay
    "In Vitro Reconstruction of Tetronate RK-682 Biosynthesis"
    Nat. Chem. Biol., 6, 99-101 (2010).

  6. H. Osada
    "Introduction of New Tools for Chemical Biology Research on Microbial Metabolites"
    Biosci. Biotechnol. Biochem., 74, 1135-1140 (2010).

  7. W. Hua, H. Yamane, B. Gao, J. Jiang, S. Li, H. S. Kato, M. Kawai, T. Hatsui, Y. Luo, N. Kosugi, and H. Agren
    "A Systematic Study of Soft-X-Ray Spectra of poly(dG)-poly(dC) and poly(dA)-poly(dT) DNA Duplexes"
    J. Phys. Chem. B 114, 7016-7021 (2010).

  8. T. Stewart, M. Nishiura, Y. Konno, Z. Hou, G. J. McIntyre, and R. Bau
    "The Space between: Neutron Diffraction Studies Reveal Multiple Hydrogen Atom Coordination Numbers in an Anionic Dysprosium Hydride Cluster"
    Inorg. Chim. Acta, 363, 562-566 (a special issue) (2010).

  9. T. Shima and Z. Hou
    "Selective Ammonolysis of Half-Sandwich Rare-Earth Metal Dialkyl and Polyhydride Complexes: Synthesis of Polyamido Rare-Earth Complexes Having Novel Structures"
    Dalton Trans., 39, 6858-6863 (a special issue) (2010).

  10. Y. Takahide, M. Kimata, K. Hazama, T. Terashima, S. Uji, T. Konoike, and H. M. Yamamoto
    "Charge Transport in Charge-Ordered Layered Crystals θ-(BEDT-TTF)2MZn(SCN)4 (M=Cs, Rb): Effects of Long-Range Coulomb Interaction and Pauli Exclusion Principle"
    Phys. Rev. B, 81, 235110/1-235110/18 (2010).

  11. M. Yamashita, N. Nakata, Y. Senshu, M. Nagata, H. M. Yamamoto, R. Kato, T. Shibauchi, and Y. Matsuda
    "Highly Mobile Gapless Excitations in a Two-Dimensional Candidate Quantum Spin Liquid"
    Science, 328, 1246-1248 (2010).

  12. T. Yamamoto, Y. Nakazawa, R. Kato, K. Yakushi, H. Akutsu, A. S. Akustu, H. Yamamoto, A. Kawamoto, S. S. Turner, and P. Day
    "Charge Fluctuation of the Superconducting Molecular Crystals"
    Physica B, 405, S237-S239 (2010).

  13. H. Mizuno, P. Dedecker, R. Ando, T. Fukano, J. Hofkens, and A. Miyawaki
    "Higher Resolution in Localization Microscopy by Slower Switching of a Photochromic Protein"
    Photochem. Photobiol. Sci., 9(2), 239-248 (2010).

Molecular Ensemble Analysis Research
  1. M. Okawa, M. Matsunami, K. Ishizaka, R. Eguchi, M. Taguchi, A. Chainani, Y. Takata, M. Yabashi, K. Tamasaku, Y. Nishino, T. Ishikawa, K. Kuga, N. Horie, S. Nakatsuji, and S. Shin
    "Strong valence fluctuation in the quantum critical heavy fermion superconductor β-YbAlB4: a hard x-ray photoemission study"
    Phys. Rev. Lett., 104, 247201/1-247201/4 (2010).

  2. Y. Horikawa, T. Tokushima, A. Hiraya, and S. Shin
    "Pronounced polarization anisotropy in resonant X-ray emission from acetic acid molecules in solution"
    Phys. Chem. Chem. Phys., 12, 9165-9168 (2010).

  3. T. Tokushima, Y. Harada, Y. Horikawa, O. Takahashi, Y. Senba, H. Ohashi, L. G. M. Pettersson, A. Nilsson, and S. Shin
    "High resolution X-ray emission spectroscopy of water and its assignment based on two structural motifs" J. Electron Spectroscopy and Related Phenomena, 177, 192-205 (2010).

  4. P. A. Bhobe, A. Chainani, M. Taguchi, T. Takeuchi, R. Eguchi, M. Matsunami, K. Ishizaka, Y. Takata, M. Oura, Y. Senba, H. Ohashi, Y. Nishino, M. Yabashi, K. Tamasaku, T. Ishikawa, K. Takenaka, H. Takagi, and S. Shin
    "Evidence for a correlated insulator to antiferromagnetic metal transition in CrN"
    Phys. Rev. Lett., 104, 236404/1-236404/4 (2010).

  5. M. Taguchi, A. Chainani, M. Matsunami, R. Eguchi, Y. Takata, M. Yabashi, K. Tamasaku, Y. Nishino, T. Ishikawa, S. Tsuda, S. Watanabe, C. T. Chen, Y. Senba, H. Ohashi, K. Fujiwara, Y. Nakamura, H. Takagi, and S. Shin
    "Anomalous state sandwiched between fermi liquid and charge ordered mott-insulating phases of Ti4O7"
    Phys. Rev. Lett., 104, 106401/1-106401/4 (2010).

  6. T. Shimojima, K. Ishizaka, Y. Ishida, N. Katayama, K. Ohgushi, T. Kiss, M. Okawa, T. Togashi, X. Y. Wang, C. T. Chen, S. Watanabe, R. Kadota, T. Oguchi, A. Chainani, and S. Shin
    "Orbital-dependent modifications of electronic structure across the magnetostructural transition in BaFe2As2"
    Phys. Rev. Lett., 104, 057002/1-057002/4 (2010).

  7. J. Miyawaki, A. Chainani, Y. Takata, M. Mulazzi, M. Oura, Y. Senba, H. Ohashi, and S. Shin
    "Out-of-plane nesting driven spin spiral in ultrathin Fe/Cu(001) films"
    Phys. Rev. Lett., 104, 066407/1-066407/4 (2010).

  8. T. Ikeya, A. Sasaki, D. Sakakibara, Y. Shigemitsu, J. Hamatsu, T. Hanashima, M. Mishima, M. Yoshimasu, N. Hayashi, T. Mikawa, D. Nietlispach, M. Walchli, B. O. Smith, M. Shirakawa, P. Guntert, and Y. Ito
    "NMR protein structure determination in living E. coli cells"
    Nat. Protoc. 5, 1051-1060 (2010).

  9. S. Isogai, S. Kanno, M. Ariyoshi, H. Tochio, Y. Ito, A. Yasui, and M. Shirakawa
    "Solution structure of a zinc-finger domain that binds to poly-ADP-ribose"
    Genes to Cells, 15, 101-110 (2010).

  10. T. Yamamoto, Y. Shimizu, T. Ueda, and Y. Shiro
    "Mg2+ Dependence of 70S Ribosomal Protein Flexibility Revealed by Hydrogen/Deuterium Exchange and Mass Spectrometry"
    J. Biol. Chem., 285, 5646-5652 (2010).

  11. J. Hasegawa, Y. Ise, K. Fujimoto, A. Kikuchi, E. Fukumura, A. Miyawaki, and Y. Shiro
    "Excited States of Fluorescent Proteins, mKO and DsRed: Chromophore-Protein Electrostatic Interaction Behind the Color Variations"
    J. Phys. Chem. B, 114, 2971-2979 (2010).

  12. T. Kurahashi, A. Kikuchi, Y. Shiro, M. Hada, and H. Fujii
    "Unique Properties and reactivity of High-Valent Manganese-Oxo versus Manganese-Hydroxo in the Salen Platform"
    Inorg. Chem., 49, 6664-6672 (2010).

  13. K. Hayashi, K. Yasuda, H. Sugimoto, S. Ikushiro, M. Kamakura, A. Kittaka, R. Horst, T. Chen, M. Ohta, Y. Shiro, and T. Sakaki
    "Three-Step Hydroxylations of Vitamin D3 by a Genetically Engineered CYP105A1"
    FEBS Lett., 277, 3999-4009 (2010).

  14. T. Sakaki, H. Sugimoto, K. Hayashi, K. Yasuda, E. Munetsna, M. Kamakura, S. Ikushiro, and Y. Shiro
    "Bioconversion of Vitamin D to Its Active Form by Bacterial or Mammalian Cytochromes P450"
    Biochim. Biophys. Acta, 1814, 249-256 (2010).

  15. L. W. Chung, X. Li, H. Sugimoto, Y. Shiro, and K. Morokuma
    "ONIOM Study on a Missing Piece in Our Understanding of Heme Chemistry: Bacterial Tryptophan 2,3-Dioxygenase with Dual Oxidants"
    J. Am. Chem. Soc., 132, 11993-12005 (2010).

  16. O. Shoji, T. Fujishiro, S. Nagano, S. Tanaka, T. Hirose, Y. Shiro, and Y. Watanabe
    "Understanding Substrate Misrecognition of Hydrogen Peroxide-Dependent Cytochrome P450 from Bacillus subtilis"
    J. Bio. Inorg. Chem., 15, 1331-1339 (2010).

  17. T. Hino, Y. Matsumoto, S. Nagano, H. Sugimoto, Y. Fukumori, T. Murata, S. Iwata, and Y. Shiro
    "Structural Basis of Biological N2O Generation by Bacterial Nitric Oxide Reductase"
    Science, 330, 1666-1670 (2010).

  18. S. Yamaguchi, H. Hosoi, M. Yamashita, P. Sen, and T. Tahara
    "Physisorption Gives Narrower Orientational Distribution than Chemisorption on a Glass Surface: A Polarization-Sensitive Linear and Nonlinear Optical Study"
    J. Phys. Chem. Lett., 1, 2662-2665 (2010).

  19. H. Watanabe, S. Yamaguchi, S. Sen, A. Morita, and T. Tahara
    "Half-hydration" at the Air/Water Interface Revealed by Heterodyne-Detected Electronic Sum Frequency Generation Spectroscopy, Polarization Second Harmonic Generation, and Molecular Dynamics Simulation"
    J. Chem. Phys., 132, 144701/1-9 (2010).

  20. D. Tomono, T. Kawamata, Y. Hirayama, M. Iwasaki, I. Watanabe, K. Ishida, and T. Matsuzaki
    "Progress in Development of New μSR Spectrometer at RIKEN-RAL"
    J. Physics: Conference Series, 225, 012056-1-4 (2010).

  21. Risdiana, Fitrilawati, R. Hidayat, R. E. Siregar, M. O. Tjia, and I. Watanabe
    "μSR Study of Electron Radical Dynamics in Regio-Regular Polythiophene"
    J. Phys.: Conference Series, 200, 052024/1-4, (2010).

  22. Y. Ishii, M. Nagasawa, T. Suzuki, I. Watanabe, T. Matsuzaki, H. M. Yamamoto, and R. Kato
    "Zero-Field and Longitudinal-Field μSR Studies of Quasi-One-Dimensional Organic Conductor, TMTTF2PF6"
    Physica B, 405, S98-S100 (2010).

  23. Risdiana, Fitrilawati, R. E. Siregar, R. Hydayat, A. A. Nugroho, M. O. Tjia, Y. Ishii, and I. Watanabe
    "Intra and Inter Chain Polaron Diffusion in Regio-Random Polythiophene Studied by Muon Spin Relaxation"
    Physica B, 405, S381-S383 (2010).

  24. Risdiana, Fitrilawati, R. E. Siregar, R. Hidayat, A. A. Nugroho, M. O. Tjia, Y. Ishii, and I. Watanabe
    "Field and Temperature Dependent Charge Transport Characteristics in Regio-Regular Poly (3-octylthiophene-2,5-diyl) Studied by Muon Spin Relaxation"
    J. Phys.: Conference Series, 225, 012003/1-5 (2010).

  25. N. Hosono, T. Kajitani, T. Fukushima, K. Ito, S. Sasaki, M. Takata, and T. Aida
    "Large-Area Three-Dimensional Molecular Ordering of a Polymer Brush by One-Step Processing"
    Science, 330, 808-811 (2010).

  26. S. Shimomura, M. Higuchi, R. Matsuda, K. Yoneda, Y. Hijikata, Y. Kubota, Y. Mita, J. Kim, M. Takata, and S. Kitagawa
    "Selective Sorption of Oxygen and Nitric Oxide by an Electron-Donating Flexible Porous Coordination Polymer"
    Nature Chem., 2, 633-637 (2010).

  27. A. Y. Ganin, Y. Takabayashi, P. Jeglic, D. Arcon, A. Potocnik, P. J. Baker, Y. Ohishi, M. T. McDonald, M. D. Tzirakis, A. McLennan, G. R. Darling, M. Takata, M. J. Rosseinsky, and K. Prassides
    "Polymorphism Control of Superconductivity and Magnetism in Cs3C60 close to the Mott Transition"
    Nature, 466, 221-225 (2010).

  28. C. H. Shih, C. F. Sheu, K. Kato, K. Sugimoto, J. Kim, Y. Wang, and M. Takata
    "The Photo-Induced Commensurate Modulated Structure in Site-Selective Spin Crossover Complex trans-[Fe(abpt)2(NCS)2]"
    Dalton Trans., 39, 9794-9800 (2010).

  29. Y. Ito and P. Selenko
    "Cellular Structural Biology"
    Curr. Opin. Struct. Biol., 20, 640-648 (2010).
  30. A. Sato, M. Mishima, A. Nagai, S.-Y. Kim, Y. Ito, T. Hakoshima, J.-G. Jee, and K. Kitano
    "Solution Structure of the HRDC Domain of Human Bloom Syndrome Protein BLM"
    J. Biochem., 148, 517-525 (2010).

  31. H. Sugimoto, O. Takikawa, and Y. Shiro
    "Tryptophan Catabolism by Heme Dioxygenases"
    in Handbook of Porphyrin Science (K. M. Kadish, K. M. Smith, R. Guilard, Eds.), 5, Chapter 24, 71-122 (2010).

  32. Y. Shiro, and S. Nagano
    "NO Chemistry by Heme-Enzyme"
    in Handbook of Porphyrin Science (K. M. Kadish, K. M. Smith, R. Guilard, Eds.), 5, Chapter 25, 123-163 (2010).

  33. S. Yanagisawa, H. Sugimoto, Y. Shiro, and T. Ogura
    "A Specific Interaction of L-Tryptophan with CO of CO-Bound Indoleamine 2,3-Dioxygenase Identified by Resonance Raman Spectroscopy"
    Biochemistry, 49, 10081-10088 (2010).