Chigusa Kobayashi, Jaewoon Jung, Yasuhiro Matsunaga, Takaharu Mori, Tadashi Ando, Koichi Tamura, Motoshi Kamiya, Yuji Sugita. "GENESIS 1.1: A hybrid-parallel molecular dynamics simulator with enhanced sampling algorithms on multiple computational platforms" J. Comput. Chem., (2017) DOI: 10.1002/jcc.24874
Koichi Tamura and Shigehiko Hayashi, "Atomistic Modeling of Alternating Access of a Mitochondrial ADP/ATP Membrane Transporter with Molecular Simulations" PLoS ONE,12(7), e0181489 (2017).
Koichi Tamura and Shigehiko Hayashi, "Role of Bulk Water Environment in Regulation of Functional Hydrogen-Bond Network in Photoactive Yellow Protein" J. Phys. Chem. B, 119, 15537-15549 (2015).
Koichi Tamura and Shigehiko Hayashi, "Linear Response Path Following: A Molecular Dynamics Method To Simulate Global Conformational Changes of Protein upon Ligand Binding" J. Chem. Theory Comput., 11, 2900-2917 (2015).
