November 21 (Thursday)
Session 1 | |
---|---|
09:30 - 09:40 | Opening by Yuji Sugita (RIKEN) |
09:40 - 10:10 | John E. Straub (Boston University) |
Critical evaluation of the use of micelles in structural studies of soluble and membrane proteins | |
10:10 - 10:40 | Li Suan Mai (Polish Academy of Science) |
Computer-aided drug design: basic concepts and applications to influenza virus and Alzheimer's disease | |
<< Break >> | |
11:00 - 11:30 | Charles L. Brooks III (University of Michigan) |
Modeling pH-mediated processes in integral membrane proteins and peptides | |
11:30 - 12:00 | Changbong Hyeon (Korea Institute for Advanced Study) |
Manifestation of molecular heterogeneity in dynamics of biomolecules | |
<< Lunch (Kobe Kachoen) >> | |
Session 2: Japanese Young Scientists | |
13:30 - 13:50 | Jaewoon Jung (RIKEN) |
Development of GENESIS for large scale molecular dynamics simulation | |
13:50 - 14:10 | Yasuhiro Matsunaga (RIKEN) |
Sequential data assimilation to single-molecule FRET photon-counting data by using molecular dynamics simulations | |
14:10 - 14:30 | Yoshitake Sakae (Nagoya University) |
Refinement of force-field parameters for protein systems | |
14:30 - 14:50 | Yuko Ito (Yokohama City University) |
Free energy simulations for the conformational change of the αβ subunits in F1-ATPase after the ATP hydrolysis | |
14:50 - 15:10 | Kazuhiro Takemura (University of Tokyo) |
Evaluation of protein-protein complex model using molecular dynamics simulation with the solution theory in the energy representation | |
15:10 - 15:30 | Tsuyoshi Terakawa (Kyoto University) |
Transcription factor p53 search and recognition mechanism on naked and chromosomal DNA | |
<< Break >> | |
Session 3 | |
16:00 - 16:30 | Robert Best (National Institutes of Health) |
Models for the effect of molecular chaperones on protein folding and misfolding | |
16:30 - 17:00 | Giovanni La Penna (Institute for Chemistry of Organo-Metallic Compounds) |
Metal ions in biological systems: why models are so important | |
17:00 - 17:30 | Jeffery B. Klauda (University of Maryland) |
Mechanisms for a novel pore-forming lipid and lipid binding to a peripheral membrane protein | |
17:30 - 17:40 | Closing by Yuko Okamoto (Nagoya University) |